Presentations

  • Leslie Smith, “CARMEN and spike detection and sorting”, Stockholm, INCF meeting 2012, 17- 6- 2012 . | PDF download
  • Matthias H Hennig, Alessandro Maccione, Mauro Gandolfo, Matthew Down, Stephen J Eglen, Luca Berdondini, Evelyne Sernagor, “Analysis of simultaneous multielectrode recordings with 4,096 channels: changing dynamics of spontaneous activity in the developing retina”, Stockholm, Sweden, CNS*2011, 7- 2011 .
  • Thomas Nowotny, “Flexible neuronal network simulation framework using code generation for NVidia® CUDA”, Newcastle University, CARMEN Consortium Meeting, 24- 5- 2011 . | PDF download
  • Marc de Kamps, “A Modeller’s Perspective on the Benefits of a”, Newcastle University, CARMEN Consortium Meeting, 24- 5- 2011 . | PDF download
  • Liz Stuart, Roy Tucker, “iPipeline- visualization in an intuitive and flexible environment”, Newcastle University, CARMEN Consortium Meeting, 24- 5- 2011 . | PDF download
  • Jennifer Simonotto, Marcus Kaiser, Evelyne Sernagor, Stephen Eglen, “Network Extraction and Analysis in CARMEN”, Newcastle University, CARMEN Consortium Meeting, 24- 5- 2011 . | PDF download
  • Leslie Smith, “Processing raw electrophysiological signals in CARMEN:detecting and sorting spikes”, Newcastle University, CARMEN Consortium Meeting, 23- 5- 2011 . | PDF download
  • Evelyne Sernagor, “CARMEN for the storage and analysis of rich datasets obtained from 60 and 4,096 channels MEA recordings of retinal activity”, Newcastle University, CARMEN Consortium Meeting, 23- 5- 2011 . | PDF download
  • Leslie Smith, Bojian Liang, Martyn Fletcher, Jim Austin, “The design and implementation of the Neurophysiology Data translation Format (NDF)”, Karolinska Institute, Stockholm, INCF meeting 2011, 5- 2011 . | PDF download
  • Colin Ingram – Video of a lecture at the 3rd Congress of the International Neuroinformatics Coordinating Facility (INCF), “Creating an e-science collaborative environment for neurophysiology”, 31- 8- 2010 . | External link
  • Leslie S. Smith, Shahjahan Shahid, Elena Phoka, Simon R. Schultz, “Detection of events in non-stationary electrophysiological signals”, Amsterdam, 7th FENS 2010 Forum, Conference Poster, 3- 7- 2010 . | PDF download
  • Dr. Bojian Liang, “NDF data format and API implementation”, York, Consortium meeting, 25- 3- 2010 . | PDF download
  • Christoph Echtermeyer, Luciano da F. Costa, Francisco A. Rodrigues, Marcus Kaiser, “Comparing Brain Connectivity Fingerprints of Singular-Node Motifs”, Edinburgh, Scotland, INCF UK Node Congress – Analysing and Modelling the Neural System in Health and Disease, Conference Poster, 1- 2- 2010 . | PDF download
  • Paul Charlesworth, Andrew Morton, Stephen J. Eglen, Seth G. N. Grant, “Buffering of mutations in hippocampal neuronal networks”, Cambridge Neuroscience Symposium, 2010 . | PDF download
  • Pedreira C., Martinez J., Ison MJ, Quian Quiroga R, “How many neurons can we see with extracellular recordings?”, Chicago, USA, Society for Neuroscience, Conference Poster, 21- 10- 2009 .
  • E. Sernagor, C. Adams, J. Simonotto, S. J. Eglen, M. A. Lumb, G. J. Clowry, O. Dkhissi-Benyahya, H. M. Cooper, “Early postnatal plasticity in the visual system of the cone rod homeobox (Crx) knockout mouse”, Chicago, USA, Society for Neuroscience, Conference Talk, 21- 10- 2009 .
  • Jose Vega Gonzalez, Stuart Baker, “A novel algorithm for automated cell finding”, Chicago, USA, Society for Neuroscience, Conference Poster, 21- 10- 2009 . | PDF download
  • Jennifer Simonotto, “Analysis of spontaneous activity patterns in the developing retina: extracting and analyzing dynamical networks”, Chicago, USA, Society for Neuroscience Meeting, Poster, 21- 10- 2009 . | PDF download
  • A. K. Roopun, J. Simonotto, M. Pierce, A. Jenkins, I. Schofield, M. Kaiser, M. Whittinton, R. Traub, M. Cunningham, “A non-synaptic mechanism underlying interictal discharges in human epileptic neocortex”, Chicago, USA, Society for Neuroscience, Conference Poster, 19- 10- 2009 . | PDF download
  • M. R. Bale, R. A. A. Ince, R. S. Peterson, “Transformation in the neural code from receptors to cortex: Representation of complex whisker stimuli”, Chicago, USA, Society for Neuroscience, Conference Poster, 18- 10- 2009 . | PDF download
  • C. D. Ingram, P. Watson, L. S. Smith, T. Jackson, M. Jessop, B. Liang, M. Fletcher, H. G. Hiden, S. J. Woodman, J. Austin, “The CARMEN cyberinfrastructure platform for analysis and sharing of electrophysiological data”, Chicago, USA, Society for Neuroscience, Conference Poster, 18- 10- 2009 . | PDF download
  • Elizabeth R. Williams, Stuart N. Baker, “Repeating spatiotemporal patterns found in somatosensory cortex after median nerve stimulation occur at chance levels”, Chicago, USA, Society for Neuroscience, Conference Poster, 18- 10- 2009 . | PDF download
  • Leslie S. Smith, Shahjahan Shahid, “Assessing the effectiveness of cepstrum of bispectrum spike detection on simultaneously recorded intra-and extra-cellularly recorded data”, Chicago, USA, Society for Neuroscience, Conference Poster, 14- 10- 2009 . | PDF download
  • Jennifer Simonotto, “Analysis of spontaneous activity patterns in developing retina: algorithms and results”, Berlin, Germany, Computational Neuroscience Society Meeting, Poster, 7- 2009 .
  • Shahjahan Shadid, Leslie Smith, “Cepstrum of Bispectrum Spike Detection applied to Extracellular Signals with Concurrent Intracellular Signals”, Berlin, Germany, Computational Neuroscience Conference 2009, Poster, 7- 2009 . | PDF download | External link
  • Jennifer Simonotto, “Analysis of spontaneous activity patterns in developing retina: extracting and analyzing dynamical networks”, Venice, Italy, Network Science Conference, 7- 2009 . | PDF download
  • Jennifer Simonotto, “Algorithm development and multi-modal analysis of MEA retinal data for comparison across lab, genetic strain, and age”, 2009 British Neuroscience Association Annual Meeting, Poster, 4- 2009 . | PDF download
  • R. A. A. Ince, R. S. Petersen, D. C. Swan, S. Panzeri, “Python for Information Theoretic Analysis of Neural Data”, Edinburg, Scotland, Annual Meeting UK Mathematical Neuroscience Network, 23- 3- 2009 . | PDF download
  • Paul Charlesworth, Andrew Morton, Stephen Eglen, Seth Grant, “Altered network activity profiles in hippocampal neurons from GluR1-knockout mice cultured on multi-electrode arrays”, British Neuroscience Association Annual Meeting, 2009 . | PDF download
  • Andrew Morton, Paul Charlesworth, Stephen Eglen, Seth Grant, “Disrupted network-activity profiles in cultured hippocampal neurons lacking GluR1”, Cambridge Neuroscience Symposium, 2009 . | PDF download
  • S. Shahid, L.S. Smith, “Extracellular spike detection using Cepstrum of Bispectrum”, Washington DC, USA, Society for Neuroscience Meeting, Poster, 11- 2008 . | External link
  • Christoph Echtermeyer, Evelyne Sernagor, Christopher Adams, V Anne Smith, “Causal Pattern Recovery (CPR) – A Novel Analysis Technique for Neural Spike Train Data”, Stockholm, Sweden, 1st INCF Congress of Neuroinformatics, Conference, 7- 9- 2008 .
  • Shahjahan Shahid, Leslie Smith, “A Novel Technique for Spike Detection in Extracellular Neurophysiological Recordings using Cepstrum of Bispectrum”, Lausanne, Switzerland, EUSIPCO 2008, 16th European Signal Processing Conference, Conference Paper, 25- 8- 2008 . | PDF download | External link
  • Christoph Echtermeyer, “Causal Pattern Recovery (CPR) – A Novel Analysis Technique for Neural Spike Train Data”, Cambridge, UK, Young Physiologists’ Symposium 2008, 12- 7- 2008 .
  • Christopher Adams, Jennifer Simonotto, Stephen Eglen, Evelyne Sernagor, “Multielectrode Array Recordings Of Neural Activity Patterns In The Developing Retina Of The Cone Rod Homeobox Knockout (Crx-/-) Mouse”, Reutlingen, Germany, MEA 2008, Reutlingen, Conference, 8- 7- 2008 . | PDF download
  • Jennifer Simonotto, Stephen Eglen, Christoph Echtermeyer, Christopher Adams, Marcus Kaiser, Evelyne Sernagor, “Leveraging CARMEN Resources for Multi-modal Analysis of MEA Data”, Reutlingen, Germany, MEA meeting 2008, Conference, 8- 7- 2008 .
  • Frank Gibson, Jim Austin, Colin Ingram, Martyn Fletcher, Tom Jackson, Mark Jessop, Alastair Knowles, Bojian Liang, Phillip Lord, Georgios Pitsilis, Panayiotis Periorellis, Jennifer Simonotto, Paul Watson, Leslie Smith, “The CARMEN Virtual Laboratory: Web-Based Paradigms for Collaboration in Neurophysiology”, Reutlingen, Germany, MEA Meeting 2008, Conference, 8- 7- 2008 . | PDF download
  • A Roopun, J Simonotto, M Cunningham, “Detection and Characterisation of ripple and fast ripple signals from epileptic in-vitro human brain slices”, Dundee, International League against Epilepsy Annual Meeting, 7- 2008 .
  • Paul Watson, Jim Austin, “CARMEN: a Scalable Science Cloud”, Seattle, Google Scalability Conference 2008, 14- 6- 2008 . | PDF download
  • J. Simonotto, S. Eglen, C. Echrermeyer, C. Adams, M. Kaiser, E. Sernagor, “Using CARMEN resources for high throughput and multimodal analysis of neural network dynamics in developing retina”, Norwich, UK, International Workshop and Conference on Network Science, 6- 2008 .
  • C. Adams, J Simonotto, SJ. Eglen, E. Sernagor, “Multielectrode Array Recordings Of Neural Activity Patterns In The Developing Retina Of The Cone Rod Homeobox Knockout (Crx-/-) Mouse”, Society for Neuroscience Meeting, 2008 .
  • J. Simonotto, S. Eglen, C. Echrermeyer, C. Adams, M. Kaiser, E. Sernagor, “Using CARMEN resources for high throughput multi-modal analysis and algorithm development”, Society for Neuroscience Meeting, 2008 .
  • Leslie S. Smith, Shahjahan Shahid, Anthony Vernier (Univ. de franche comte,France), “Testing spike detection techniques using synthetic data”, San Diego, Society for Neuroscience Meeting, Poster, 11- 2007 . | External link
  • SJ. Eglen, C. Adams, C. Echtermeyer, M. Kaiser, J. Simonotto, E. Sernagor, “The CARMEN project: Large-scale analysis of spontaneous retinal activity during development”, European Retinal Meeting, 10- 2007 .
  • P. Charlesworth, S. J. Eglen, L. Humphreys, A. Morton, S. G. N. Grant, “Patterns of spontaneous activity in hippocampal cultures developing on multi electrode arrays: the influence of the NMDA receptor”, British Neuroscience Association Annual Meeting, 2007 . | PDF download
  • L.S. Smith, “Neuroinformatics: what can E-Science offer Neuroscience (Or E-Science and Neuroscience: Experimental, Computational and Cognitive)”, Molyvos, Lesvos, Greece, Brain Inspired Cognitive Systems, Keynote presentation, 10- 2006 . | External link